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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015903179.1_cds_XP_016453137.1_47294
CDS Infomation

[gene=LOC107777597] [db_xref=GeneID:107777597] [protein=zinc finger protein MAGPIE-like] [protein_id=XP_016453137.1] [location=complement(join(109322..110237,111085..111481,111864..111957))] [gbkey=CDS]
Sequence

ATGACAGAGGAAGTAATCTTAAGTGGATTTAACTCAATTGAAGGATCCAATCCTCTCCCT
CTCAAGAAAAAAAGAAACCTTCCAGGAAATCCAGATCCTGAAGCAGAAGTGATTGCCTTA
TCACCAAAGACACTGATGGCAACCAACAGATTCTTATGTGAAATTTGTGGAAAAGGTTTT
CAAAGAGATCAAAATCTGCAACTTCACAGGAGAGGACATAATTTACCTTGGAAACTAAAG
CAAAGGACTTCAAAAGAAGTGAGAAAGAGAGTTTACGTTTGCCCTGAAAAGAGTTGTGTT
CACCATCACGCTTCAAGAGCTTTAGGAGATCTCACTGGGATAAAGAAACACTACTGTAGA
AAACATGGAGAAAAGAAGTGGAAATGTGAGAAATGCTCTAAAAGATATGCTGTGCAATCG
GATTGGAAAGCTCATTCAAAAACTTGTGGCACTAGGGAATATAGATGTGATTGTGGTACT
ATTTTTTCAAGGCGAGACAGCTTCGTGACTCATAGGGCTTTTTGTGATGCATTAGCTGAG
GAGACAGCTAGAGTTACTGCAGCATCAAATATGCACAACCCATTGGCTGGAAACAACATC
GATTACCATTTCATAGGTTCCCCCTTAGGTCCAAACATGGCACAACATTTCTCTTCTCTT
TTCAAGCCAATTTCAACCAACAACGAAAACTCAGACCCAATTATGAGAAGAGATCAACTG
TCACTTTGGAATATGGGGCAAGTATCTCAACAGCAAGAAACAATAGGTAACAATAATCTC
CAAGAAATCCATCAAATAAGTCCTCTAATTCAGACTTCAGCTGCAGCTGTTTATGACACA
AATACCCTTCTTGCACCACGTTCAAATCCTCCACCAGTAAATTACAACCATGTTAACTGG
CAACAATTAACAAACACTTCATCTGCAAACATAAGCGTTCCTTCATTGTTTAGTACCCAA
CACCAATCTCACCAGCAAATTACACCTTCTTCTACTGCTAGTATGTCAGCTACTGCTTTG
CTCCAAAAAGCTGCTCAGATAGGAGCAACAACCACAACTACTGACCCATCATTTCTTGGA
AACAATTTTGGGATGAATAATTGCAATGTCAAGAACAATAATGTTCAAGTTCAAGAAGTG
AATAACAACAAGTTCTGTGGATTTTACGTTACTACTACAAATAACTCAATCAGTACTAGT
CTTGGAAGTGAAGTAGATCAAGGTTCAGTGAATGATTTCTCTACTTTGAACCAGCTGCAG
ATGTATAATCCTCCTTCAAAACGACGTCACATAATAACTCGTGAAGATAGTGTGACAGGA
GGAGGAGTGGGAGGGCAAACTAGAGATTTCTTGGGAGTTGGGGTACAATCAATCTGCCAC
CCTTCTTCCATCAATGGATGGATATGA

Peptide Sequence

PEP ID

XP_016453137.1
PEP Infomation

PREDICTED: zinc finger protein MAGPIE-like [Nicotiana tabacum]
Sequence

MTEEVILSGFNSIEGSNPLPLKKKRNLPGNPDPEAEVIALSPKTLMATNRFLCEICGKGF
QRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKSCVHHHASRALGDLTGIKKHYCR
KHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYRCDCGTIFSRRDSFVTHRAFCDALAE
ETARVTAASNMHNPLAGNNIDYHFIGSPLGPNMAQHFSSLFKPISTNNENSDPIMRRDQL
SLWNMGQVSQQQETIGNNNLQEIHQISPLIQTSAAAVYDTNTLLAPRSNPPPVNYNHVNW
QQLTNTSSANISVPSLFSTQHQSHQQITPSSTASMSATALLQKAAQIGATTTTTDPSFLG
NNFGMNNCNVKNNNVQVQEVNNNKFCGFYVTTTNNSISTSLGSEVDQGSVNDFSTLNQLQ
MYNPPSKRRHIITREDSVTGGGVGGQTRDFLGVGVQSICHPSSINGWI

Transcript Sequence

Gene sequence data has not been registered.